subSites

Subset a sites object

Description

Subset a sites object

Usage

subSites(x, keep = NULL, prune = NULL, region = NULL)

Arguments

Argument	Description
x	a sites object (read in by readSites)
keep	A list of haplotypes to keep
prune	A list of haplotypes to prune
region	A numeric vector of length 2 giving minimum and maximum coordinates (1-based)

Value

A sites object subsetted by haplotypes and/or region