argweaver¶
Process/Plot ARGweaver results in R. Reads and displays results from command line programs arg-sample and arg-summarize.
Functions¶
drawTreegetColsgetHapsgetLogFilegetOuterPopPathgetPathsFromLogFilegetRootNodegetTimesgetTimesFromLogFilegetTreeDepthmakeTransparentmeanColormultiHistmultiPopsizeFileFromPsmcplotBwplotLeafTraceplotPsmcplotSitesplotStatsplotTracesplotTreeplotTreesplotTreesAtSitesplotTreesFromBedpostorder.argpostorderRecprobCoalCountspsmcToPopsizereadArgSummaryreadLeafTracereadPopFilereadPopModelreadPsmcreadSitesreadStatsFilescalePopModelsubSiteswriteSites