getCols

Choose columns from summary file

Description

Given an ARGweaver summary file, return columns of interest

Usage

getCols(x, inds, prefix = "", suffix = "", or = FALSE)

Arguments

Argument	Description
x	A data frame read by readSummary()
inds	A vector of character strings containing individual (or haplotype names) relevant to desired columns
prefix	Choose only columns with this prefix
suffix	Choose only columns with this suffix
or	If TRUE, return columns that mention any of the individuals. If FALSE, return columns that mention all the individuals

Value

A list of column names from x that meet the criteria

Note

This may not work as desired if some individual names are subsets of others